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ML Engineer, Agents & Reasoning

Clera

Berlin, State of Berlin, GermanyFull Time
Engineering
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ML Engineer, Agents & Reasoning at Clera is a full time role based in Berlin, State of Berlin, Germany. Listed skills: Engineering. It was published on 4 August 2026 and was open at last check.

ML Engineer, Agents & Reasoning at Clera — key details
RoleML Engineer, Agents & Reasoning
CompanyClera
LocationBerlin, State of Berlin, Germany
Employment typeFull Time
Skills listedEngineering
Published4 August 2026
StatusOpen at last check

About the Role

This is a hands-on ML engineering role at the frontier of agentic AI for scientific discovery. You'll build systems that reason, plan, and act inside real materials discovery workflows — turning predictive models into reliable, operational decision-making agents that work directly with physical experiments and laboratory automation. You'll sit at the intersection of AI research, software engineering, and lab science, embedding autonomy, safety, and observability into end-to-end discovery pipelines.

The company is a seed-stage deeptech startup operating in the AI-driven materials acceleration and cleantech space, with a small but highly experienced team and institutional backing. This is an on-site role based in Berlin, Germany. Right to work in Germany without employer visa sponsorship is required.

What You'll Do

  • Design and implement agentic systems that plan, reason, and act across materials discovery workflows involving experiments, simulations, and scientific datasets.
  • Build decision-making systems that select next actions under uncertainty and encode when autonomy should act versus when humans should stay in the loop.
  • Implement planning, control logic, and uncertainty-aware decision-making tailored to physical systems and experimental constraints.
  • Encode operational, experimental, and safety constraints directly into agent behavior; define stopping criteria, fallback strategies, and recovery mechanisms to prevent brittle behavior.
  • Collaborate with AI researchers to embed predictive models into agent workflows and translate model outputs into executable real-world actions.
  • Integrate agents with laboratory automation and software systems so decisions translate into physical outcomes.
  • Instrument agents with logging, monitoring, and diagnostics to ensure observability and support debugging.
  • Build evaluation frameworks that assess decision quality, learning efficiency, and overall system behavior — going beyond model accuracy alone.
  • Analyze failure cases and iterate on system design based on real-world operational outcomes.
  • Own systems end-to-end: from prototype through production deployment and ongoing operation.

What We're Looking For

Required:

  • 4–8 years of hands-on ML engineering experience, preferably with autonomous agents or decision-making systems in production or applied research settings.
  • Demonstrated experience designing and implementing agent-based systems for real-world workflows, including planning, action selection under uncertainty, and defined stopping/fallback/recovery logic.
  • Strong track record delivering production-grade ML systems with an emphasis on observability, logging, monitoring, and diagnostics.
  • Experience integrating ML/AI models with lab automation, scientific instrumentation, or hardware/software systems.
  • Proficiency in Python and at least one major ML framework (e.g., PyTorch, TensorFlow, or JAX), plus strong data tooling skills (NumPy, SciPy, etc.).
  • Background in scientific or structured data modeling — rather than language-model-first systems.
  • Knowledge of safety constraints and safety-aware validation practices for autonomous decision-making in physical environments.
  • Strong cross-functional communication skills; comfortable working across AI research, engineering, and laboratory teams.
  • English fluency (additional language skills are a plus).
  • Right to work in Germany without employer sponsorship — visa sponsorship is not available for this role.

Nice to Have:

  • Experience in materials science, chemistry, or adjacent physical sciences domains.
  • Background in probabilistic reasoning, Bayesian optimization, or active learning.
  • Familiarity with reinforcement learning, model-based planning, or control theory.
  • Additional European language skills.

Location

This is a full-time, on-site position in Berlin, Germany. Candidates must have the right to work in Germany; visa sponsorship is not provided.

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Create your free OnJob profile to apply — we'll take you to Clera's application after sign-up. · Posted 4 Aug 2026.

ML Engineer, Agents & Reasoning at Clera — questions answered

What does the ML Engineer, Agents & Reasoning role at Clera pay?

Clera does not publish a salary on this ML Engineer, Agents & Reasoning listing, so OnJob shows no figure for it rather than an estimate. For what this role pays across the market, the OnJob salary guides aggregate the live listings that do disclose pay.

Where is the ML Engineer, Agents & Reasoning role at Clera based?

Clera lists this ML Engineer, Agents & Reasoning role in Berlin, State of Berlin, Germany, advertised as full time work at that location. Larger employers sometimes cover several sites under one city name, so confirm the exact office with Clera before you apply.

What skills does the ML Engineer, Agents & Reasoning role at Clera require?

The ML Engineer, Agents & Reasoning at Clera listing names Engineering. Those are the skills the employer put on the posting itself, so they are the ones worth matching in your profile and covering first in an interview.

Is the ML Engineer, Agents & Reasoning role at Clera still open?

The ML Engineer, Agents & Reasoning posting at Clera was open at OnJob's last check of the employer's careers page, having been published on 4 August 2026. OnJob re-checks source listings on each build and marks a role closed once it disappears, but listings can close without notice, so the employer's own page is the final word.

How do you apply for the ML Engineer, Agents & Reasoning role at Clera?

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